Web server for TFBS PFM database search using PFV algorithm

This web interface is to demonstrate the effectiveness of our PFV algorithm for PFM searching and retrieval
Paper is submitted to PLoS ONE for peer review

 

Input the Motif PFM (see suppoted input formats):

Search in :

How many returns per query PFM ? :     distance metric :     k :

   


For help and general information, please refer to the documentation page
The source code for our algorithm (written as perl script) could be downloaded from here

Research Funding: The project is funded by a grant (EF0849615) from National Science Foundation.

Web server maintained by
Minli Xu (mxu5@uncc.edu) & Dr Zhengchang Su (zcsu@uncc.edu)
Bioinformatics Research Center, University of North Carolina - Charlotte
Last update: 10-June-2009 11:40 AM